{"text_format":"3","workbook":"xls","n_sheets":4,"sheets":["non-embryogenic and embryogenic","Light quality treatment","phytohormone treatment ","The nine organs of SJM cultivar"],"read":"whole","date_system":"1900","formulas":"cached_only"}

{"sheet":"non-embryogenic and embryogenic","index":0,"n_rows":76,"n_cols":8,"rows_kept":76,"flags":["formulas_cached_only"]}
["Table S3.1 The SNP annotation of the DlAP2/ERF superfamily detected in the NEC and embryogenic cultures of 'HHZ' cultivar."]
["scaffold","UNIGENE","POS","REF","NEC.raw","EC.raw","IcpEC.raw","GE.raw"]
["scaffold1","Dlo_000585.2",6822272,"T",null,"A","A","A"]
["scaffold1","Dlo_000585.2",6822431,"A",null,"T","T","T"]
["scaffold1","Dlo_000585.2",6822469,"A",null,"T","T","T"]
["scaffold1","Dlo_000585.2",6822477,"A",null,"G","G","G"]
["scaffold1","Dlo_000585.2",6822537,"C",null,"T","T","T"]
["scaffold1","Dlo_000585.2",6822551,"C",null,"A","A","A"]
["scaffold1","Dlo_000585.2",6822651,"C",null,"T","T","T"]
["scaffold1","Dlo_000585.2",6822954,"A",null,"G","G","G"]
["scaffold1","Dlo_000585.2",6823012,"T",null,"C","C","C"]
["scaffold1","Dlo_000585.2",6824237,"A",null,"G","G","G"]
["scaffold1","Dlo_000585.2",6825355,"T",null,"C","C","C"]
["scaffold1","Dlo_000585.2",6825418,"T",null,"C","C","C"]
["scaffold7","Dlo_028566.1",1853243,"A",null,"G","G","G"]
["scaffold7","Dlo_028566.1",1853297,"A",null,"G","G","G"]
["scaffold8","Dlo_030836.1",1783632,"G",null,"C","C","C"]
["scaffold8","Dlo_030836.1",1783781,"G",null,"A","A","A"]
["scaffold8","Dlo_030836.1",1783902,"C",null,"G","G","G"]
["scaffold8","Dlo_030836.1",1784060,"C",null,"T","T","T"]
["scaffold8","Dlo_030836.1",1784231,"A",null,"T","T","T"]
["scaffold8","Dlo_030836.1",1786780,"C",null,"G","G","G"]
["scaffold16","Dlo_007513.1",1158215,"C",null,"G","G","G"]
["scaffold16","Dlo_007513.1",1158418,"G",null,"A","A","A"]
["scaffold16","Dlo_007513.1",1159191,"G",null,"A","A","A"]
["scaffold16","Dlo_007513.1",1159712,"C",null,"G","G","G"]
["scaffold37","Dlo_018664.1",1261187,"C",null,"T","T","T"]
["scaffold46","Dlo_021787.1",743855,"C","A","A","A","A"]
["scaffold46","Dlo_021787.1",743872,"C","A","A","A","A"]
["scaffold46","Dlo_021787.1",743904,"C","T","T","T","T"]
["scaffold46","Dlo_021787.1",743939,"C","A","A","A","A"]
["scaffold46","Dlo_021787.1",744099,"A",null,"G","G","G"]
["scaffold46","Dlo_021787.1",744387,"A",null,"G","G","G"]
["scaffold46","Dlo_021787.1",746107,"A",null,"T","T","T"]
["scaffold46","Dlo_021787.1",746380,"G",null,"A","A","A"]
["scaffold46","Dlo_021787.1",746638,"C",null,"A","A","A"]
["scaffold46","Dlo_021787.1",746690,"A",null,"G","G","G"]
["scaffold49","Dlo_022613.1 ",428593,"T",null,"C","C","C"]
["scaffold57","Dlo_025295.1",1267057,"T","C","C","C","C"]
["scaffold93","Dlo_033261.1",381480,"A","C",null,"C","C"]
["scaffold240","Dlo_013163.1 ",354716,"G","T","T","T","T"]
["scaffold240","Dlo_013163.1 ",354759,"G","T","T","T","T"]
["scaffold240","Dlo_013163.1 ",354904,"A","G","G","G","G"]
["scaffold265","Dlo_014268.1",216982,"A",null,"C","C","C"]
["scaffold266","Dlo_014298.1",57627,"A",null,"G","G","G"]
["scaffold266","Dlo_014298.1",57806,"C",null,"T","T","T"]
["scaffold281","Dlo_015023.1",75515,"A",null,"G","G","G"]
["scaffold293","Dlo_015669.1",345437,"G","A","A","A","A"]
["scaffold293","Dlo_015669.1",345454,"T","G","G","G","G"]
["scaffold293","Dlo_015669.1",345512,"G","T","T","T","T"]
["scaffold293","Dlo_015669.1",345644,"G","C","C","C","C"]
["scaffold319","Dlo_016593.1",143381,"A",null,"G","G","G"]
["scaffold319","Dlo_016593.1",143489,"G",null,"A","A","A"]
["scaffold319","Dlo_016593.1",144017,"G",null,"A","A","A"]
["scaffold320","Dlo_016788.1",274536,"G",null,"C","C","C"]
["scaffold320","Dlo_016788.1",274671,"T",null,"A","A","A"]
["scaffold320","Dlo_016788.1",274690,"T",null,"A","A","A"]
["scaffold320","Dlo_016788.1",274840,"G","A",null,"A","A"]
["scaffold514","Dlo_023524.1",3256,"T",null,"C","C","C"]
["scaffold611","Dlo_026624.1",255393,"G","A","A","A","A"]
["scaffold611","Dlo_026624.1",255564,"A","G","G","G","G"]
["scaffold611","Dlo_026624.1",255660,"C","T","T","T","T"]
["scaffold611","Dlo_026624.1",255789,"C","T","T","T","T"]
["scaffold611","Dlo_026624.1",255945,"C","T","T","T","T"]
["scaffold611","Dlo_026624.1",255957,"T","C","C","C","C"]
["scaffold611","Dlo_026624.1",256155,"T","C","C","C","C"]
["scaffold677","Dlo_028019.1",17770,"A",null,"G","G","G"]
["scaffold718","Dlo_029125.1",231030,"C","T","T","T","T"]
["scaffold718","Dlo_029125.1",232021,"G","A","A","A","A"]
["scaffold718","Dlo_029125.1",232041,"T","C","C","C","C"]
["scaffold1208","Dlo_003511.1",89413,"C","G",null,"G","G"]
["scaffold2900","Dlo_015581.1",2321,"T","G",null,"G","G"]
["scaffold2900","Dlo_015581.1",5314,"T","C",null,"C","C"]
["scaffold3328","Dlo_017387.1",3212,"T","C","C","C","C"]
["scaffold3328","Dlo_017387.1",3668,"G","C","C","C","C"]
["scaffold3328","Dlo_017387.1",3709,"G","T",null,"T","T"]

{"sheet":"Light quality treatment","index":1,"n_rows":88,"n_cols":7,"rows_kept":88,"flags":["formulas_cached_only"]}
["Table S3.2 The SNP annotation of the DlAP2/ERF superfamily detected in the EC under light quality (blue, white, and dark as the control) treatments."]
["scaffold","UNIGENE","POS","REF","dark.raw","white-light.raw","blue-light.raw"]
["scaffold1","Dlo_000585.2",6822272,"T","A","A","A"]
["scaffold1","Dlo_000585.2",6822477,"A","G","G","G"]
["scaffold1","Dlo_000585.2",6822537,"C","T","T","T"]
["scaffold1","Dlo_000585.2",6822651,"C","T","T","T"]
["scaffold1","Dlo_000585.2",6822768,"A","T","T","T"]
["scaffold1","Dlo_000585.2",6822954,"A","G","G","G"]
["scaffold1","Dlo_000585.2",6823012,"T","C","C","C"]
["scaffold1","Dlo_000585.2",6824080,"C","T","T","T"]
["scaffold1","Dlo_000585.2",6824237,"A","G","G","G"]
["scaffold6","Dlo_026272.1",2234128,"G","T","T","T"]
["scaffold6","Dlo_026272.1",2234303,"C","T","T","T"]
["scaffold8","Dlo_030836.1",1783632,"G","C","C","C"]
["scaffold8","Dlo_030836.1",1783781,"G","A","A","A"]
["scaffold8","Dlo_030836.1",1783902,"C","G","G","G"]
["scaffold8","Dlo_030836.1",1784049,"C","G","G","G"]
["scaffold8","Dlo_030836.1",1784060,"C","T","T","T"]
["scaffold8","Dlo_030836.1",1786780,"C","G","G","G"]
["scaffold16","Dlo_007513.1",1158215,"C","G","G","G"]
["scaffold16","Dlo_007513.1",1158306,"G","A","A","A"]
["scaffold16","Dlo_007513.1",1158418,"G","A","A","A"]
["scaffold16","Dlo_007513.1",1158644,"T","G","G","G"]
["scaffold16","Dlo_007513.1",1158685,"A","T","T","T"]
["scaffold16","Dlo_007513.1",1158708,"C","G","G","G"]
["scaffold16","Dlo_007513.1",1158733,"T","C","C","C"]
["scaffold16","Dlo_007513.1",1158953,"C","T","T","T"]
["scaffold16","Dlo_007513.1",1158997,"A","G","G","G"]
["scaffold16","Dlo_007513.1",1159191,"G","A","A","A"]
["scaffold16","Dlo_007513.1",1159712,"C","G","G","G"]
["scaffold29","Dlo_015474.1",1495982,"G","C","C","C"]
["scaffold37","Dlo_018664.1",1261187,"C","T","T","T"]
["scaffold46","Dlo_021787.1",743855,"C","A","A","A"]
["scaffold46","Dlo_021787.1",743872,"C","A","A","A"]
["scaffold46","Dlo_021787.1",743904,"C","T","T","T"]
["scaffold46","Dlo_021787.1",743939,"C","A","A","A"]
["scaffold46","Dlo_021787.1",744099,"A","G","G","G"]
["scaffold46","Dlo_021787.1",744239,"T","C","C","C"]
["scaffold46","Dlo_021787.1",746107,"A","T","T","T"]
["scaffold46","Dlo_021787.1",746380,"G","A","A","A"]
["scaffold46","Dlo_021787.1",746638,"C","A","A","A"]
["scaffold46","Dlo_021787.1",746690,"A","G","G","G"]
["scaffold49","Dlo_022613.1 ",428593,"T","C","C","C"]
["scaffold57","Dlo_025295.1",1267057,"T","C","C","C"]
["scaffold59","Dlo_025714.2",227600,"G","A","A","A"]
["scaffold59","Dlo_025714.2",228204,"T","G","G","G"]
["scaffold59","Dlo_025714.2",228322,"A","C","C","C"]
["scaffold145","Dlo_006200.1",719062,"A","G","G","G"]
["scaffold145","Dlo_006200.1",719152,"T","G","G","G"]
["scaffold162","Dlo_007774.3",922788,"C","T","T","T"]
["scaffold162","Dlo_007774.3",922829,"G","T","T","T"]
["scaffold240","Dlo_013163.1 ",354716,"G","T","T","T"]
["scaffold240","Dlo_013163.1 ",354759,"G","T","T","T"]
["scaffold240","Dlo_013163.1 ",354904,"A","G","G","G"]
["scaffold266","Dlo_014298.1",57627,"A","G","G","G"]
["scaffold266","Dlo_014298.1",57806,"C","T","T","T"]
["scaffold275","Dlo_014729.1",28259,"G","T","T","T"]
["scaffold281","Dlo_015023.1",74776,"G","A","A","A"]
["scaffold293","Dlo_015669.1",345437,"G","A","A","A"]
["scaffold293","Dlo_015669.1",345454,"T","G","G","G"]
["scaffold293","Dlo_015669.1",345512,"G","T","T","T"]
["scaffold293","Dlo_015669.1",345644,"G","C","C","C"]
["scaffold319","Dlo_016593.1",143381,"A","G","G","G"]
["scaffold319","Dlo_016593.1",143489,"G","A","A","A"]
["scaffold319","Dlo_016593.1",144017,"G","A","A","A"]
["scaffold320","Dlo_016787.1",266322,"G","T","T","T"]
["scaffold320","Dlo_016787.1",266412,"C","T","T","T"]
["scaffold320","Dlo_016788.1",274508,"T","C","C","C"]
["scaffold320","Dlo_016788.1",274536,"G","C","C","C"]
["scaffold320","Dlo_016788.1",274671,"T","A","A","A"]
["scaffold320","Dlo_016788.1",274690,"T","A","A","A"]
["scaffold320","Dlo_016788.1",274717,"T","C","C","C"]
["scaffold320","Dlo_016788.1",274750,"C","T","T","T"]
["scaffold320","Dlo_016788.1",274840,"G","A","A","A"]
["scaffold320","Dlo_016794.1",299815,"G","T","T","T"]
["scaffold611","Dlo_026624.1",255393,"G","A","A","A"]
["scaffold611","Dlo_026624.1",255564,"A","G","G","G"]
["scaffold611","Dlo_026624.1",255660,"C","T","T","T"]
["scaffold611","Dlo_026624.1",255789,"C","T","T","T"]
["scaffold611","Dlo_026624.1",255945,"C","T","T","T"]
["scaffold611","Dlo_026624.1",255957,"T","C","C","C"]
["scaffold611","Dlo_026624.1",256155,"T","C","C","C"]
["scaffold718","Dlo_029125.1",231030,"C","T","T","T"]
["scaffold718","Dlo_029125.1",231993,"T","A","A","A"]
["scaffold718","Dlo_029125.1",232021,"G","A","A","A"]
["scaffold718","Dlo_029125.1",232041,"T","C","C","C"]
["scaffold1840","Dlo_009234.2",8756,"C","A","A","A"]
["scaffold1840","Dlo_009234.2",8797,"G","A","A","A"]

{"sheet":"phytohormone treatment ","index":2,"n_rows":94,"n_cols":19,"rows_kept":94,"flags":["formulas_cached_only"]}
["Table S3.3 The SNP annotation of the DlAP2/ERF superfamily detected in the EC under hormone (2,4-D and KT) treatments."]
["scaffold","UNIGENE","POS","REF","2,4-D+KT.raw1","2,4-D+KT.raw2","2,4-D+KT.raw3",null,"2,4-D.raw1","2,4-D.raw2","2,4-D.raw3",null,"KT.raw1","KT.raw2","KT.raw3",null,"MS.raw1","MS.raw2","MS.raw3"]
["scaffold1","Dlo_000585.2",6822272,"T","A","A","A",null,"A","A","A",null,"A","A","A",null,"A","A","A"]
["scaffold1","Dlo_000585.2",6822477,"A","G","G","G",null,"G","G","G",null,"G","G","G",null,"G","G","G"]
["scaffold1","Dlo_000585.2",6822537,"C","T","T","T",null,"T","T","T",null,"T","T","T",null,"T","T","T"]
["scaffold1","Dlo_000585.2",6822651,"C","T","T","T",null,"T","T","T",null,"T","T","T",null,"T","T","T"]
["scaffold1","Dlo_000585.2",6822954,"A","G","G","G",null,"G","G","G",null,"G","G","G",null,"G","G","G"]
["scaffold1","Dlo_000585.2",6823012,"T","C","C","C",null,"C","C","C",null,"C","C","C",null,"C","C","C"]
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["scaffold59","Dlo_025714.2",227600,"G","A","A","A",null,"A","A","A",null,"A","A","A",null,"A","A","A"]
["scaffold59","Dlo_025714.2",228204,"T","G","G","G",null,"G","G","G",null,"G","G","G",null,"G","G","G"]
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["scaffold162","Dlo_007774.3",923006,"T","C","C","C",null,"C","C","C",null,"C","C","C",null,"C","C","C"]
["scaffold240","Dlo_013163.1 ",354716,"G","T","T","T",null,"T","T","T",null,"T","T","T",null,"T","T","T"]
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["scaffold240","Dlo_013163.1 ",354904,"A","G","G","G",null,"G","G","G",null,"G","G","G",null,"G","G","G"]
["scaffold266","Dlo_014298.1",57627,"A","G","G","G",null,"G","G","G",null,"G","G","G",null,"G","G","G"]
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["scaffold275","Dlo_014727.1",13877,"A","G","G","G",null,"G","G","G",null,"G","G","G",null,"G","G","G"]
["scaffold275","Dlo_014729.1",28259,"G","T","T","T",null,"T","T","T",null,"T",null,"T",null,"T","T","T"]
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{"sheet":"The nine organs of SJM cultivar","index":3,"n_rows":161,"n_cols":13,"rows_kept":161,"flags":["formulas_cached_only"]}
["Table S3.4 The SNP annotation of the DlAP2/ERF superfamily detected in nine organs of 'SJM' cultivar."]
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